BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A11SP1|AL427563
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1634 1710 0.0
>3x_Contig1634
Length = 14275
Score = 1710 bits (858), Expect = 0.0
Identities = 868/876 (99%)
Strand = Plus / Minus
Query: 1 tttcccatagctttaattttcgggttctatgaratttcagttccaagttgcagtgaaaga 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12261 tttcccatagctttaattttcgggttctatgaaatttcagttccaagttgcagtgaaaga 12202
Query: 61 dagatatttwtdctcactatacagatgcgctgtcaagatagacaccggaggtaccattca 120
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12201 aagatatttatactcactatacagatgcgctgtcaagatagacaccggaggtaccattca 12142
Query: 121 gtaacatcagtgggatatacgatacgcgtgattattcatagcagccatgactatgcgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12141 gtaacatcagtgggatatacgatacgcgtgattattcatagcagccatgactatgcgtaa 12082
Query: 181 cgaattgatacagtttgtaggacaaattccaccggtgacccgaggaatatgtctcttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12081 cgaattgatacagtttgtaggacaaattccaccggtgacccgaggaatatgtctcttaat 12022
Query: 241 ggtgttaatatgtttgatccaacgcttgaacgtattaccgtactatttcagcgatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12021 ggtgttaatatgtttgatccaacgcttgaacgtattaccgtactatttcagcgatttcaa 11962
Query: 301 atggtctttacgtggtgtattgttcaagttccaaatctggaggttgttcactagtttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11961 atggtctttacgtggtgtattgttcaagttccaaatctggaggttgttcactagtttcct 11902
Query: 361 catcttaccaaacgatgccatgaaagcatgtttcgacctatacgcagtatactcgaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11901 catcttaccaaacgatgccatgaaagcatgtttcgacctatacgcagtatactcgaaatc 11842
Query: 421 gttacatctcgaattagtgcacttcagcaacaaatccatcgattatttgttttacatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11841 gttacatctcgaattagtgcacttcagcaacaaatccatcgattatttgttttacatatg 11782
Query: 481 tktcaactttgcattgatcgtsgtgctcgtagaagcatgccagatctcatacccagtgtt 540
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11781 tttcaactttgcattgatcgtcgtgctcgtagaagcatgccagatctcatacccagtgtt 11722
Query: 541 cactaacgcattcataggaatgatcctatatacgtggactctggacaacagcaacgtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11721 cactaacgcattcataggaatgatcctatatacgtggactctggacaacagcaacgtgaa 11662
Query: 601 ggtaatgttctacggattattcccaatcttgggtaaatatctatcgctagtgcatctttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11661 ggtaatgttctacggattattcccaatcttgggtaaatatctatcgctagtgcatctttt 11602
Query: 661 cgtttcgttcttatttgatgacgggaccgatggttacagcaggttttgcgtcacaatggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11601 cgtttcgttcttatttgatgacgggaccgatggttacagcaggttttgcgtcacaatggt 11542
Query: 721 cgggttttgtgctggatacgtttactcctgcctagacacatggacttacggtcccttgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11541 cgggttttgtgctggatacgtttactcctgcctagacacatggacttacggtcccttgta 11482
Query: 781 cggttatctgatggggaaggacccagcgtacggattctctgggagaggtcatttcagatc 840
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11481 cggttatctgatggggaaggacccagcgtacggattctctggaagaggtcatttcagatc 11422
Query: 841 accaagatggttctcctcgatcattctatggrtagg 876
||||||||||||||||||||||||||||||| ||||
Sbjct: 11421 accaagatggttctcctcgatcattctatggatagg 11386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4539
Number of Sequences: 1807
Number of extensions: 4539
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)